Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019909.1 Corchorus olitorius cultivar O-4 contig19942, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19664

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64--187
44
2.8
43
92
3
203
20
11
25
42
1.85
824--1257
219
2.0
219
93
0
751
45
6
9
38
1.64
1201--1260
28
2.2
26
80
11
66
53
6
8
31
1.57
1398--1444
22
2.1
22
84
7
60
61
2
12
23
1.42
1321--1505
93
2.0
93
90
2
291
50
2
14
32
1.54
1544--1601
31
1.9
30
92
3
98
46
5
17
31
1.70
9668--9729
19
3.1
19
65
13
52
24
9
17
48
1.77
13325--13362
16
2.4
16
82
13
51
71
7
13
7
1.31

Tables:   1

The End!