Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019921.1 Corchorus olitorius cultivar O-4 contig19954, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49232

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
494--526
16
2.1
15
94
5
57
0
18
0
81
0.68
497--526
15
2.0
15
93
0
51
0
16
0
83
0.65
1964--1988
7
3.6
7
100
0
50
88
12
0
0
0.53
14594--14682
46
1.9
46
90
0
142
30
22
16
30
1.96
15048--15099
5
10.0
5
91
8
86
59
0
0
40
0.97
34711--34959
121
2.0
127
89
7
393
50
1
11
36
1.46
36131--36218
45
2.0
43
89
6
133
42
22
4
30
1.74
44515--44602
37
2.5
35
83
10
115
50
18
9
22
1.75
44982--45012
15
2.1
15
93
0
53
22
6
58
12
1.58

Tables:   1

The End!