Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019931.1 Corchorus olitorius cultivar O-4 contig19964, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6992

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
282--338
27
2.1
27
84
15
73
42
8
1
47
1.45
3015--3087
21
3.4
22
81
5
69
39
13
23
23
1.90
3002--3087
42
2.0
43
81
2
102
41
12
19
25
1.87
3002--3166
44
3.8
44
77
8
140
40
11
15
32
1.84
3002--3166
22
7.6
22
77
8
124
40
11
15
32
1.84
6371--6395
2
12.5
2
100
0
50
52
0
0
48
1.00

Tables:   1

The End!