Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019941.1 Corchorus olitorius cultivar O-4 contig19974, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26455

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2493--2601
55
2.0
55
94
0
191
23
15
15
44
1.85
3710--3936
25
9.1
25
85
5
273
25
20
30
23
1.98
3713--3936
50
4.5
50
88
6
339
25
20
30
23
1.98
3710--3936
75
3.0
75
87
4
318
25
20
30
23
1.98
4471--4526
22
2.5
22
94
5
96
17
23
10
48
1.79
16041--16118
29
2.6
30
80
13
90
19
23
15
42
1.89
16159--16237
32
2.5
31
79
2
95
18
24
27
29
1.98
23019--23052
2
17.0
2
100
0
68
50
0
0
50
1.00
26420--26455
2
18.0
2
94
0
63
47
0
0
52
1.00

Tables:   1

The End!