Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019947.1 Corchorus olitorius cultivar O-4 contig19980, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24044

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
589--665
3
25.7
3
75
5
57
22
38
5
33
1.76
580--665
30
2.9
29
82
3
91
20
38
6
33
1.80
588--665
21
3.9
20
75
11
79
21
38
6
33
1.79
8802--8826
11
2.3
11
100
0
50
24
8
36
32
1.84
10012--10068
12
4.5
12
81
12
69
50
8
15
24
1.72
10010--10062
27
2.0
26
92
3
88
49
9
18
22
1.76
19604--19635
6
5.3
6
100
0
64
65
0
34
0
0.93

Tables:   1

The End!