Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019950.1 Corchorus olitorius cultivar O-4 contig19983, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64819

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1194
333
3.6
334
88
2
1770
31
14
17
36
1.90
3009--3081
32
2.3
31
83
6
92
47
19
12
20
1.81
13224--13261
19
2.0
20
89
5
60
36
5
0
57
1.21
15553--15587
2
17.5
2
100
0
70
51
0
0
48
1.00
20133--20432
148
2.0
148
96
1
548
28
16
15
39
1.90
26670--26696
6
4.5
6
100
0
54
14
0
0
85
0.61
26745--26773
3
9.7
3
100
0
58
34
0
0
65
0.93
54520--54578
30
2.0
30
86
0
82
59
1
15
23
1.45
57434--57462
2
14.5
2
100
0
58
51
0
0
48
1.00

Tables:   1

The End!