Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019955.1 Corchorus olitorius cultivar O-4 contig19988, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36261

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6228--6268
11
3.8
11
83
3
57
48
0
0
51
1.00
6235--6269
15
2.3
15
90
0
52
45
0
0
54
0.99
22131--22166
12
2.8
13
91
8
65
36
13
25
25
1.93
24393--24455
29
2.2
29
100
0
126
49
22
14
14
1.79
24823--24859
2
18.5
2
100
0
74
51
0
0
48
1.00
35817--35844
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!