Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019959.1 Corchorus olitorius cultivar O-4 contig19992, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10578

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
778--812
15
2.3
15
100
0
70
11
8
34
45
1.71
2669--2764
46
2.1
46
100
0
192
17
10
27
44
1.81
5020--5051
11
2.9
11
95
0
55
12
18
43
25
1.85
5380--5494
49
2.3
51
80
10
121
37
8
20
33
1.83
6185--6277
33
2.7
34
82
14
118
29
15
20
35
1.93
6184--6277
36
2.7
34
84
12
120
29
14
20
35
1.93
6254--6337
42
2.0
42
83
6
107
26
13
16
44
1.84
8329--8382
23
2.3
23
87
0
81
38
0
16
44
1.48

Tables:   1

The End!