Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019962.1 Corchorus olitorius cultivar O-4 contig19995, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19057

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
331--409
28
3.2
24
79
17
83
53
7
1
37
1.38
343--402
28
2.1
28
100
0
120
50
6
0
43
1.28
377--425
19
2.5
21
81
18
70
53
10
0
36
1.35
837--877
17
2.3
18
91
4
66
56
2
4
36
1.34
1205--1243
19
2.1
19
95
0
69
33
0
30
35
1.58
3169--3208
20
2.0
21
90
5
64
37
17
27
17
1.92
3187--3241
28
2.0
28
85
0
74
40
20
20
20
1.92
18418--18472
28
2.0
28
85
3
76
20
3
5
70
1.22
18418--18475
27
2.1
27
84
6
73
20
3
5
70
1.21
18447--18484
20
1.9
20
84
10
51
28
2
5
63
1.30

Tables:   1

The End!