Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019964.1 Corchorus olitorius cultivar O-4 contig19997, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13564

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
575--2870
332
6.9
328
79
7
2033
33
13
16
36
1.88
579--2818
993
2.3
979
81
7
2592
33
13
16
36
1.88
4555--4924
22
16.6
22
68
14
100
36
11
13
37
1.82
4555--4656
43
2.3
44
78
8
118
38
11
10
39
1.77
4848--4928
41
1.9
41
85
7
108
37
11
16
35
1.84
5042--5201
85
1.9
85
86
2
232
48
10
16
24
1.77
7109--7159
26
2.0
26
84
7
68
49
3
1
45
1.32
12598--12650
26
2.0
26
100
0
106
30
11
15
43
1.81

Tables:   1

The End!