Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019968.1 Corchorus olitorius cultivar O-4 contig20001, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5520

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59--99
20
2.0
20
95
0
73
46
21
21
9
1.80
493--570
27
2.8
28
78
3
95
38
24
16
20
1.93
493--567
28
2.7
27
83
2
96
38
25
16
20
1.92
872--1656
51
15.5
50
93
1
1210
26
26
11
35
1.91
898--1658
305
2.5
306
94
1
1339
26
26
12
34
1.92
1716--1909
50
3.9
50
89
1
275
30
14
26
28
1.95
3097--3149
22
2.6
19
78
16
70
22
24
11
41
1.86
5012--5047
11
3.2
11
92
4
54
22
2
16
58
1.51

Tables:   1

The End!