Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019984.1 Corchorus olitorius cultivar O-4 contig20017, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24782

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3959--4011
11
5.2
10
78
17
56
39
18
1
39
1.62
3959--4012
19
2.6
21
77
19
60
40
18
1
38
1.61
5673--5778
50
2.1
50
91
0
167
26
27
14
32
1.94
5673--5811
50
2.7
50
85
2
143
24
26
16
32
1.96
5811--6108
46
6.4
46
81
9
295
20
27
16
35
1.94
5811--6230
49
9.0
47
78
6
320
21
28
15
34
1.94
6242--6360
40
3.0
40
79
6
123
11
26
23
38
1.89
12900--12929
15
2.0
15
93
0
51
50
0
33
16
1.46

Tables:   1

The End!