Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019987.1 Corchorus olitorius cultivar O-4 contig20020, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14499

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3976--4010
2
17.5
2
100
0
70
48
0
0
51
1.00
4284--4317
6
5.5
6
89
3
50
76
0
23
0
0.79
5977--6774
36
22.4
36
80
5
728
19
20
18
41
1.90
5983--6776
179
4.5
180
82
5
830
19
21
18
41
1.91
6985--7533
30
18.2
30
85
4
721
20
14
18
46
1.84
11178--11252
27
2.8
26
78
12
80
41
25
14
18
1.89

Tables:   1

The End!