Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019992.1 Corchorus olitorius cultivar O-4 contig20025, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19927

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
435--465
15
2.1
15
93
0
53
51
0
0
48
1.00
1930--1959
11
2.7
11
94
0
51
13
33
10
43
1.77
3649--3687
14
2.9
13
80
3
51
53
2
2
41
1.28
3673--3928
124
2.0
127
87
6
367
50
1
10
37
1.48
8866--8959
46
2.0
46
100
0
188
24
22
17
36
1.95
8981--9041
22
2.8
22
89
0
95
37
9
9
42
1.71
9026--9084
29
2.0
29
83
6
75
42
11
10
35
1.76
9055--9125
23
3.2
21
77
15
72
36
18
8
36
1.81
9055--9138
21
3.9
21
78
12
80
34
17
7
40
1.77
11612--11680
28
2.4
28
85
2
102
37
17
26
18
1.93

Tables:   1

The End!