Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019993.1 Corchorus olitorius cultivar O-4 contig20026, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12605

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1155--1183
12
2.3
13
94
5
51
6
6
17
68
1.34
3720--3767
21
2.2
21
82
17
55
62
0
0
37
0.95
5069--5130
30
2.0
31
96
3
117
46
3
24
25
1.67
8946--8970
13
1.9
13
100
0
50
44
0
0
56
0.99
10165--10234
29
2.3
30
78
11
81
38
5
17
38
1.73
11155--11409
132
1.9
133
87
3
372
50
1
10
37
1.48

Tables:   1

The End!