Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020013.1 Corchorus olitorius cultivar O-4 contig20046, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24768

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2310--2349
17
2.3
18
82
4
55
32
2
0
65
1.06
5811--5846
19
1.9
18
88
5
54
38
8
22
30
1.83
15560--15596
19
2.0
18
89
5
56
40
2
21
35
1.68
24387--24461
20
3.7
19
83
11
96
70
0
8
21
1.12
24387--24464
4
19.2
4
72
12
61
70
0
7
21
1.12
24405--24528
12
11.0
12
69
13
84
62
0
12
25
1.29
24400--24594
16
11.5
18
68
20
75
61
0
11
26
1.34
24514--24595
27
3.3
26
67
22
77
60
1
9
28
1.35

Tables:   1

The End!