Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020021.1 Corchorus olitorius cultivar O-4 contig20054, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23295

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--34
2
16.5
2
100
0
66
51
0
0
48
1.00
8417--8457
20
2.1
19
86
13
57
46
0
7
46
1.30
11860--11985
45
2.8
45
97
0
234
33
6
22
38
1.79
13668--13694
2
13.5
2
100
0
54
51
0
0
48
1.00
15431--15466
2
18.5
2
94
5
65
47
0
0
52
1.00
15763--15967
108
1.9
109
94
1
367
36
11
24
27
1.90
16440--16518
38
2.1
38
97
0
149
18
2
26
51
1.59
19848--19894
13
3.5
13
80
8
51
4
2
14
78
0.99
19848--19890
6
6.7
6
82
12
50
4
2
13
79
1.00
22730--22836
16
6.7
16
91
4
180
5
14
39
41
1.69
23010--23043
8
4.4
8
88
3
52
58
0
2
38
1.13

Tables:   1

The End!