Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020025.1 Corchorus olitorius cultivar O-4 contig20058, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7637

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2028--2074
18
2.6
18
80
12
51
14
4
0
80
0.85
2076--2362
135
2.1
135
93
1
495
45
13
19
20
1.84
3842--3871
15
2.1
15
93
6
53
63
6
16
13
1.50
4229--4278
21
2.4
21
89
0
73
12
24
48
16
1.79
4369--4459
42
2.2
42
86
4
121
13
23
47
16
1.81
6812--6929
53
2.2
54
83
8
161
35
11
7
44
1.70
7252--7293
15
2.7
15
92
3
66
64
14
7
14
1.48

Tables:   1

The End!