Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020026.1 Corchorus olitorius cultivar O-4 contig20059, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8597

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1797--1848
6
8.7
6
95
0
95
67
15
0
17
1.24
3454--3620
69
2.4
69
96
0
307
25
28
14
31
1.95
5770--6407
169
3.8
169
92
1
1050
26
19
17
36
1.93
6478--6709
30
8.0
30
80
8
237
20
14
17
46
1.83
6480--6709
60
3.9
59
80
13
278
20
14
17
46
1.83
7158--7261
26
4.0
27
79
9
117
22
11
24
42
1.86
7153--7257
53
2.0
53
87
5
151
21
14
22
40
1.90
7417--7456
21
2.0
21
90
5
64
22
12
17
47
1.81

Tables:   1

The End!