Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020043.1 Corchorus olitorius cultivar O-4 contig20076, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12081

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2675--2756
22
3.8
21
80
4
85
41
8
8
41
1.66
4381--4412
16
2.0
16
93
0
55
34
18
6
40
1.76
4468--4508
5
8.2
5
88
0
55
51
2
24
21
1.60
4541--4592
2
26.5
2
81
11
54
48
7
0
44
1.31
7509--7651
47
3.0
47
92
0
232
24
11
37
25
1.90
7731--7760
4
7.5
4
100
0
60
76
0
0
23
0.78

Tables:   1

The End!