Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020044.1 Corchorus olitorius cultivar O-4 contig20077, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20691

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1662--1707
22
2.0
23
87
4
67
41
2
8
47
1.46
5493--5626
71
1.9
71
89
4
200
26
12
25
35
1.92
7728--7757
2
15.0
2
100
0
60
50
0
0
50
1.00
14838--16130
316
4.0
327
77
11
1062
36
16
14
32
1.89
15261--16130
332
2.6
328
80
6
988
37
16
14
32
1.88
16852--16881
15
1.9
16
93
6
53
53
3
0
43
1.17
17951--18031
35
2.3
35
91
0
126
34
32
6
27
1.81
17951--18056
35
3.0
35
85
0
122
32
28
8
31
1.87

Tables:   1

The End!