Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020045.1 Corchorus olitorius cultivar O-4 contig20078, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20088

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3509--3597
27
3.3
27
96
0
169
19
43
17
19
1.88
4432--4466
17
2.1
17
100
0
70
20
11
17
51
1.75
5981--6191
32
6.5
31
91
4
305
33
24
16
25
1.96
5981--6166
97
1.9
97
92
4
313
31
25
17
25
1.97
7627--7756
58
2.2
58
88
0
188
30
20
8
41
1.81
7648--7757
58
1.9
58
94
0
193
29
20
10
40
1.84

Tables:   1

The End!