Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020046.1 Corchorus olitorius cultivar O-4 contig20079, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20868

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2541--2727
93
2.0
93
94
0
329
50
1
14
33
1.52
4267--4309
19
2.3
19
95
0
77
30
11
39
18
1.86
9941--9977
19
2.0
19
89
5
58
64
0
0
35
0.94
11699--12144
222
2.0
225
90
3
702
43
8
11
36
1.72
16106--16142
18
2.1
18
100
0
74
48
5
35
10
1.61
17909--17965
25
2.3
25
96
0
105
38
33
14
14
1.85

Tables:   1

The End!