Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020059.1 Corchorus olitorius cultivar O-4 contig20092, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36999

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2813--2852
18
2.2
18
95
0
71
20
32
12
35
1.90
4672--4715
23
1.9
23
95
0
79
38
13
13
34
1.84
5880--5963
27
3.0
28
75
6
82
33
16
7
42
1.75
23077--23102
13
2.0
13
100
0
52
38
15
23
23
1.92
30511--30554
21
2.2
20
88
12
63
63
4
15
15
1.46
30517--30564
20
2.3
22
82
10
64
62
2
18
16
1.42
33773--33805
2
16.5
2
100
0
66
48
51
0
0
1.00

Tables:   1

The End!