Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020060.1 Corchorus olitorius cultivar O-4 contig20093, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20505

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3754--3797
21
2.2
20
88
12
63
54
0
6
38
1.27
8146--8195
17
3.0
16
77
8
55
18
8
18
56
1.65
10756--11060
28
10.8
28
84
3
317
19
20
22
38
1.94
10761--11060
56
5.3
57
87
5
369
18
19
23
38
1.93
10746--11060
142
2.2
141
84
2
391
19
20
22
38
1.94
10761--11061
84
3.5
86
84
3
351
18
19
22
38
1.93
16188--16233
20
2.3
20
82
14
60
34
0
6
58
1.24

Tables:   1

The End!