Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020062.1 Corchorus olitorius cultivar O-4 contig20095, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10170

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
197--301
29
3.7
28
81
8
106
40
24
15
19
1.90
597--1086
50
9.8
50
92
0
784
28
12
27
31
1.93
597--1086
201
2.4
200
91
2
786
28
12
27
31
1.93
597--1086
251
2.0
250
91
1
793
28
12
27
31
1.93
1163--1366
91
2.2
91
92
0
336
38
14
18
28
1.90
2527--2581
14
4.3
13
77
17
62
14
1
14
69
1.28
2523--2571
24
2.1
23
92
3
80
16
2
16
65
1.37
2527--2587
19
3.3
18
78
10
70
14
1
14
68
1.28

Tables:   1

The End!