Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020063.1 Corchorus olitorius cultivar O-4 contig20096, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7956

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7430--7496
6
11.7
6
76
17
63
16
1
14
67
1.31
7430--7471
22
1.9
22
95
0
75
16
0
14
69
1.20
7431--7496
17
3.9
17
79
18
75
16
1
15
66
1.32
7487--7542
20
2.8
20
78
5
60
8
1
8
80
0.98
7504--7537
12
3.1
11
88
12
52
0
0
8
91
0.43

Tables:   1

The End!