Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020064.1 Corchorus olitorius cultivar O-4 contig20097, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31203

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
863--899
2
18.5
2
100
0
74
51
0
0
48
1.00
3928--3977
21
2.4
20
87
9
73
16
36
24
24
1.94
5207--5256
20
2.5
19
87
9
73
56
0
36
8
1.29
5476--5515
19
2.1
19
85
0
53
2
22
42
32
1.67
7451--7544
45
2.2
42
88
7
136
40
20
4
35
1.72
14999--15025
2
13.5
2
100
0
54
48
0
51
0
1.00
26656--26722
27
2.5
27
97
0
125
17
22
35
23
1.95
26862--26903
15
2.8
15
92
0
75
35
35
14
14
1.86

Tables:   1

The End!