Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020070.1 Corchorus olitorius cultivar O-4 contig20103, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38052

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12555--12588
16
2.1
16
88
5
50
8
23
0
67
1.18
15008--15085
40
2.0
39
92
5
131
33
14
28
24
1.94
15008--15266
38
6.8
38
76
14
131
37
16
20
24
1.93
15063--15532
39
12.6
39
72
17
310
39
17
17
25
1.91
15064--15532
77
6.3
75
73
18
351
39
17
17
25
1.91
15254--15312
27
2.2
27
79
11
68
40
18
13
27
1.88
27131--27188
30
2.0
30
86
3
82
34
24
15
25
1.95
37918--37993
15
5.1
15
69
15
59
63
3
5
27
1.34
37909--37993
29
2.9
30
96
3
163
61
3
5
29
1.36

Tables:   1

The End!