Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020071.1 Corchorus olitorius cultivar O-4 contig20104, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20379

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64--110
23
2.0
24
88
12
71
72
4
2
21
1.12
149--181
9
3.6
9
92
8
57
87
0
12
0
0.53
149--181
10
3.4
10
87
4
50
87
0
12
0
0.53
2108--2901
357
2.2
356
94
0
1365
38
7
12
41
1.70
3333--3709
191
2.0
191
98
0
736
36
13
15
34
1.87
4052--4144
42
2.2
42
92
1
150
34
32
12
20
1.91
7011--7037
11
2.5
11
100
0
54
77
14
0
7
0.97
7004--7056
17
2.9
18
76
15
56
75
11
3
9
1.16
7274--7439
47
3.6
47
83
4
203
36
18
27
17
1.93
7413--7469
29
1.9
30
92
3
98
40
12
29
17
1.86
7366--7515
76
2.0
76
88
2
221
40
18
26
14
1.89
7593--7753
56
2.9
56
90
4
249
44
19
21
14
1.87
7652--7956
152
2.0
153
95
0
549
40
20
23
14
1.90
12038--12070
12
2.7
13
86
13
52
54
24
0
21
1.45
12100--12145
4
11.5
4
90
0
56
45
21
6
26
1.76
12041--12194
75
2.0
76
90
3
240
47
15
4
32
1.66

Tables:   1

The End!