Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020077.1 Corchorus olitorius cultivar O-4 contig20110, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13780

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2246--2291
18
2.6
18
93
3
76
43
26
15
15
1.85
2888--2930
22
2.0
22
90
0
68
44
9
6
39
1.64
3241--3333
23
3.9
24
77
13
86
35
19
8
36
1.82
3600--3764
88
1.9
87
82
7
208
35
13
9
41
1.77
2940--3854
22
42.2
21
66
18
163
35
15
9
39
1.81
7354--7389
7
5.1
7
100
0
72
13
13
55
16
1.69

Tables:   1

The End!