Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020087.1 Corchorus olitorius cultivar O-4 contig20120, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15107

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
233--299
31
2.2
31
92
5
111
20
19
11
47
1.81
547--608
2
32.5
2
76
15
51
40
0
3
56
1.15
2404--2443
21
1.9
21
94
0
71
30
10
20
40
1.85
2397--2425
14
2.1
14
100
0
58
37
6
20
34
1.80
6446--6471
12
2.2
12
100
0
52
38
7
15
38
1.76
9542--9745
102
2.0
101
98
0
390
50
21
14
13
1.76

Tables:   1

The End!