Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020097.1 Corchorus olitorius cultivar O-4 contig20130, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26947

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3181--3229
25
1.9
26
91
4
82
22
18
6
53
1.66
5993--6055
27
2.5
24
76
18
74
36
12
6
44
1.68
6839--6887
22
2.2
23
89
7
75
46
2
2
48
1.25
8104--8140
19
1.9
19
94
0
65
48
5
13
32
1.65
8791--8900
45
2.5
42
83
4
130
27
25
8
39
1.84
8791--8902
21
5.2
21
73
10
91
26
25
8
39
1.84
19611--19773
53
3.1
53
93
0
290
50
19
7
22
1.73
20113--20150
20
1.9
20
100
0
76
36
5
10
47
1.61

Tables:   1

The End!