Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020098.1 Corchorus olitorius cultivar O-4 contig20131, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32487

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4920--5038
57
2.0
59
87
4
170
47
11
8
32
1.70
5755--5808
7
7.9
7
95
4
101
42
14
27
14
1.85
5757--5808
27
1.9
27
100
0
104
42
13
28
15
1.85
11213--11241
2
15.0
2
92
7
51
48
0
51
0
1.00
12189--12232
21
2.1
21
83
8
54
31
2
0
65
1.05
14482--14509
3
9.3
3
100
0
56
32
0
67
0
0.91
30499--30529
15
2.1
15
100
0
62
45
12
6
35
1.68
31413--31442
5
6.0
5
100
0
60
80
0
20
0
0.72

Tables:   1

The End!