Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020130.1 Corchorus olitorius cultivar O-4 contig20163, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14114

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4361--4401
21
2.0
21
90
9
66
31
24
9
34
1.88
5905--6017
37
3.1
37
77
2
129
42
15
17
23
1.88
9283--9389
33
3.2
33
94
5
196
37
11
14
37
1.81
9281--9389
35
3.2
35
96
3
204
37
11
13
37
1.81
9549--9575
13
2.1
13
100
0
54
22
14
14
48
1.81
13943--14004
16
3.8
16
82
4
70
40
37
12
9
1.77

Tables:   1

The End!