Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020133.1 Corchorus olitorius cultivar O-4 contig20166, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10416

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5946--6093
76
2.0
72
85
7
199
37
10
19
31
1.86
6493--6529
20
1.9
20
94
5
67
78
0
13
8
0.96
6887--6947
10
5.7
11
83
11
74
73
9
0
16
1.08
6892--6956
23
3.0
23
80
13
75
75
9
0
15
1.04
7606--7701
50
1.9
50
93
0
165
31
16
15
36
1.90
8117--8144
12
2.3
12
100
0
56
25
7
10
57
1.58
8301--8636
69
4.9
69
91
0
510
26
29
15
27
1.96

Tables:   1

The End!