Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020145.1 Corchorus olitorius cultivar O-4 contig20178, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7974

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
373--429
13
4.8
12
79
14
64
33
3
10
52
1.53
373--429
24
2.4
24
88
5
80
33
3
10
52
1.53
373--429
12
4.8
11
81
14
69
33
3
10
52
1.53
4679--4739
3
20.3
3
100
0
122
32
0
0
67
0.91
4902--4955
21
2.7
20
78
16
58
55
12
3
27
1.54
5054--5104
20
2.5
22
75
21
56
39
9
13
37
1.78

Tables:   1

The End!