Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020146.1 Corchorus olitorius cultivar O-4 contig20179, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10736

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--91
6
16.7
6
80
16
85
56
2
0
41
1.12
1--91
8
12.5
8
79
16
85
56
2
0
41
1.12
1--110
12
9.1
13
77
18
89
58
1
0
40
1.09
51--98
3
17.3
3
83
16
68
64
0
0
35
0.94
51--102
11
4.8
11
80
19
65
65
0
0
34
0.93
48--106
11
5.2
11
74
25
52
66
0
0
33
0.92
51--106
8
7.1
8
90
9
89
66
0
0
33
0.92
1499--1550
27
2.0
25
85
7
68
67
1
0
30
1.02
2659--2693
17
2.1
17
94
0
61
25
11
0
62
1.28
10606--10686
39
2.0
40
92
2
137
50
8
3
37
1.51
10677--10723
25
1.9
24
95
4
85
29
6
8
55
1.55

Tables:   1

The End!