Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020148.1 Corchorus olitorius cultivar O-4 contig20181, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24768

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2825--2874
26
2.0
26
88
4
75
44
2
6
48
1.39
7254--7305
26
2.0
26
100
0
104
38
15
15
30
1.88
18457--18523
21
3.2
21
64
16
57
50
14
5
28
1.66
18444--18524
42
1.9
42
94
0
144
45
16
8
29
1.77
18831--18874
7
6.6
7
97
2
74
45
0
9
45
1.35
18826--18877
2
24.0
2
81
14
59
44
0
9
46
1.36
22297--22340
20
2.1
21
84
12
56
11
9
0
79
0.93
22437--22530
35
2.7
35
88
1
136
5
41
40
12
1.66
22570--22604
3
11.7
3
100
0
70
0
31
0
68
0.90

Tables:   1

The End!