Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020149.1 Corchorus olitorius cultivar O-4 contig20182, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18101

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12497--12551
11
5.1
11
76
12
51
25
1
0
72
0.94
12901--12936
16
2.2
16
90
0
54
38
25
13
22
1.91
13053--13100
24
2.0
23
84
12
60
54
2
2
41
1.24
13154--13192
2
19.5
2
94
0
69
48
0
2
48
1.15
17690--17745
29
1.9
29
92
7
96
55
5
14
25
1.60
17910--18045
72
1.9
72
87
0
200
31
11
16
39
1.85

Tables:   1

The End!