Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020162.1 Corchorus olitorius cultivar O-4 contig20195, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13477

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1194--1413
32
6.9
32
92
3
320
26
19
22
32
1.97
3762--3827
31
2.1
31
97
0
123
22
22
25
28
1.99
3784--4123
162
2.1
161
82
4
425
31
18
19
30
1.96
5781--5981
106
1.9
106
93
0
348
33
10
25
30
1.90
11334--11372
19
2.1
19
85
0
51
12
38
2
46
1.56
12998--13271
54
5.0
54
84
5
263
28
16
6
48
1.71
12976--13271
107
2.7
108
78
10
291
27
16
7
48
1.72
13334--13455
32
3.9
30
76
18
124
26
15
7
50
1.70

Tables:   1

The End!