Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020165.1 Corchorus olitorius cultivar O-4 contig20198, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25154

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2002--2051
21
2.4
21
96
0
91
26
20
36
18
1.95
2728--2916
33
5.8
32
80
7
157
28
20
21
29
1.98
2751--2916
66
2.5
66
86
2
201
28
22
19
29
1.98
19561--19618
27
2.1
27
96
0
107
12
3
27
56
1.51
19733--19787
13
4.2
13
95
0
101
0
38
21
40
1.54
24108--24168
27
2.3
27
82
0
68
34
13
22
29
1.92

Tables:   1

The End!