Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020166.1 Corchorus olitorius cultivar O-4 contig20199, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18341

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
130--173
22
2.0
22
86
0
61
63
9
11
15
1.51
3856--3968
60
1.9
60
88
0
172
33
19
12
34
1.89
3856--3991
60
2.3
59
83
5
157
33
17
13
35
1.89
6723--6763
21
2.0
21
85
0
55
43
21
19
14
1.87
6896--6929
17
2.0
17
94
0
59
38
2
17
41
1.65
10857--11221
180
2.0
180
95
1
660
41
21
13
23
1.88
15420--15472
25
2.1
25
96
0
97
41
1
22
33
1.65
17895--17920
13
2.0
13
100
0
52
46
15
0
38
1.46

Tables:   1

The End!