Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020171.1 Corchorus olitorius cultivar O-4 contig20204, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16037

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2666--2741
28
2.6
27
85
12
89
42
13
23
21
1.88
3152--3181
6
5.0
6
100
0
60
0
66
16
16
1.25
6206--6261
11
4.8
11
80
10
67
50
8
5
35
1.57
6210--6261
13
4.4
13
77
15
51
46
9
5
38
1.61
6206--6261
24
2.4
23
84
3
76
50
8
5
35
1.57
7451--7495
3
16.7
3
78
21
55
24
0
0
75
0.80
7449--7498
5
10.0
5
87
12
68
24
0
0
76
0.80
7458--7563
30
3.6
29
70
23
71
16
10
0
71
1.18
10691--10732
21
2.0
21
85
0
57
16
9
16
57
1.65
11497--11537
21
1.9
22
85
5
57
41
14
14
29
1.86

Tables:   1

The End!