Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020181.1 Corchorus olitorius cultivar O-4 contig20214, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20153

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
109--206
35
2.7
35
80
12
90
65
1
6
27
1.23
1650--1707
11
5.1
11
76
12
55
65
1
3
29
1.19
5800--5837
19
2.0
20
85
15
53
63
2
5
28
1.30
11004--11213
107
2.0
107
97
0
393
45
11
16
26
1.82
14020--14087
36
1.9
35
82
8
84
54
4
2
38
1.36
14578--14618
18
2.3
18
95
0
73
7
24
12
56
1.61
15052--15086
11
3.2
11
83
0
52
77
17
5
0
0.96
18638--18684
22
2.1
22
92
0
76
44
6
23
25
1.77

Tables:   1

The End!