Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020183.1 Corchorus olitorius cultivar O-4 contig20216, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27284

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5170--5402
58
4.0
58
88
1
324
27
33
21
17
1.96
10063--10137
27
2.8
27
92
6
118
33
16
14
36
1.89
11755--11802
22
2.1
24
84
7
64
27
10
12
50
1.73
12771--12818
25
1.9
25
95
0
87
50
2
18
29
1.59
14250--14295
24
1.9
23
83
16
58
58
2
17
21
1.49
20735--20769
17
2.1
17
100
0
70
17
25
5
51
1.67
26313--26414
45
2.3
42
90
6
150
33
5
19
41
1.76

Tables:   1

The End!