Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020186.1 Corchorus olitorius cultivar O-4 contig20219, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18241

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
358--415
29
2.0
29
96
0
107
44
18
3
32
1.67
7515--7548
2
17.0
2
100
0
68
50
0
0
50
1.00
8169--8216
20
2.4
20
92
0
78
22
18
25
33
1.97
8330--8417
44
2.0
44
100
0
176
20
27
0
52
1.47
8479--8507
14
2.1
14
100
0
58
44
20
6
27
1.77
15228--15254
2
13.5
2
100
0
54
51
0
0
48
1.00
15797--15835
20
2.0
20
85
10
53
61
5
12
20
1.50

Tables:   1

The End!