Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020195.1 Corchorus olitorius cultivar O-4 contig20228, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12473

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
233--308
28
2.7
27
78
9
82
39
14
21
25
1.91
781--857
6
12.8
6
83
4
75
1
22
0
76
0.86
781--817
19
1.9
19
88
0
56
2
18
0
78
0.87
885--962
29
2.7
29
93
0
129
5
39
42
12
1.65
2323--2354
13
2.5
13
95
5
57
53
0
9
37
1.34
4382--4410
12
2.3
13
94
5
51
48
0
13
37
1.43

Tables:   1

The End!