Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020200.1 Corchorus olitorius cultivar O-4 contig20233, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4130

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
711--760
2
24.5
2
87
4
73
46
4
2
48
1.32
902--953
21
2.6
19
82
11
59
46
5
0
48
1.26
994--1220
116
2.0
113
90
4
357
37
10
3
48
1.55
1186--1233
21
2.3
21
85
7
62
41
4
0
54
1.20
1188--1239
18
2.8
19
85
8
63
42
3
1
51
1.31

Tables:   1

The End!