Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01020206.1 Corchorus olitorius cultivar O-4 contig20239, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20957

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86--115
2
15.0
2
92
0
51
3
46
0
50
1.18
115--139
2
12.5
2
100
0
50
48
0
0
52
1.00
137--333
4
48.0
4
92
5
331
26
1
24
47
1.58
394--418
4
6.2
4
100
0
50
48
24
0
28
1.52
7566--7619
26
2.0
28
89
7
85
42
1
27
27
1.66
19310--19478
65
2.9
55
79
16
212
35
13
14
37
1.84
19400--19503
33
3.2
33
71
8
113
33
12
15
38
1.85
19358--19520
65
2.5
65
93
0
281
33
12
15
38
1.86
19497--19795
30
9.7
30
87
6
384
28
22
20
28
1.99
19497--19795
127
2.4
120
86
5
384
28
22
20
28
1.99
20927--20957
2
15.5
2
100
0
62
48
0
0
51
1.00

Tables:   1

The End!